Batch analysis

Run a list of genes or UniProt IDs with optional coordinates or region discovery; get the same metric layers as elsewhere in DisCanVis, aggregated per row. Programmatic access: API (batch endpoint).

Batch API

Workflow guide

Start with Overview, then pick a preset topic, read the question and steps, and use Try this example to load the form.

inputInput list

Identifiers, analysis mode, and the lines to process.

Step 1
Search by
Analysis mode
Type at least 2 characters, choose a row with a GO:… id. The list below fills with main-isoform Gencode IDs (same set as Statistics → dynamic GO), not raw annotation rows.
Uses the same PPI union as Statistics (IntAct / HIPPIE / BioGRID-style rows in Interactions_Summary). Fills main-isoform Gencode accessions for the hub plus direct partners.
Cohort scope

Typical screens use a subset; enable proteome-wide for exhaustive regex/PSSM scans (longer run).

Optional: two integers after the ID for explicit coordinates.

travel_exploreRegion discovery

When a line has no coordinates, regions are taken from annotations, PEM, or motif search (regex / PSSM).

Step 2

Each modified residue is one row (1 aa). Combine with ClinVar / AlphaMissense columns for pathogenic overlap.

First row can be one-letter amino-acid headers (tab- or comma-separated). Otherwise values use order ARNDCQEGHILKMFPSTWYV. Optional comment line: # min_score: 1.5

filter_altCohort filters

Filters apply to regions found in Step 2.

Step 3
info Choose an annotation source or a motif pattern in Region discovery (Step 2) to filter discovered regions here.
Disorder cutoff

Keep regions where enough residues are disordered (combined score).

Min % disordered %
Motif island filter

For regex / PSSM hits only — core vs flanking signal.

Motif mean AlphaMissense ≥ Δ above flank reference, or core mean ≥ threshold. Default flank width = motif length per side.

Motif mean conservation ≥ Δ above flanks, or core ≥ threshold.

view_columnRequested columns

Grouped like Visual track visibility — context letters (G/D/O/M · C/P) and coloured track pills per column.

Step 4

visibility Same grouping as Visual → Track visibility. Context letters appear on each subsection header; each row is a coloured track pill.

apiView current API Optional

For scripts and integrations — live JSON/cURL from the form.


                

                

                    

                        
                    

                    

                

            

            

                Full API reference